Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 840histone modifications
  • 837candidate regulatory elements
  • 718binding sites
  • 177gene expression
  • 11accessible chromatin
  • 3eQTL
  • 2target gene predictions
  • 1representative DNase hypersensitivity sites
  • 1variant allelic effects
Date released
  • 840February, 2021
  • 114May, 2021
  • 17August, 2021
  • 6September, 2022
Available data
  • 840bed bed3+
Organism
  • 840Homo sapiens
Collection Tags
  • 840ChIP-Atlas
Biosample type
  • 579cell line
  • 92primary cell
  • 89tissue
  • 80in vitro differentiated cells
Organ
  • 48brain
  • 25bodily fluid
  • 25connective tissue
  • 24blood
  • 24epithelium
  • 13skin of body
  • 11embryo
  • 8intestine
  • 7liver
  • 7musculature of body
  • 7prostate gland
  • 7vasculature
  • 6bone element
  • 6heart
  • 6kidney
  • 6pancreas
  • 5blood vessel
  • 5extraembryonic component
  • 5large intestine
  • 5mammary gland
  • 5penis
  • 4artery
  • 4eye
  • 4lung
  • 4lymph node
  • 3placenta
  • 2bone marrow
  • 2limb
  • 2trachea
  • 2uterus
  • 1adipose tissue
  • 1bronchus
  • 1gonad
  • 1lymphatic vessel
  • 1lymphoid tissue
  • 1pituitary gland
  • 1stomach
  • 1testis
  • 1thymus
  • 1vein
Project
  • 840AMP
Genome assembly (visualization)
  • 840hg19
BIOSAMPLE
TYPE

840 results

search-icontable-tab-icon
Clear Filters
histone modifications
cell line
breast cancer cell11
gastric cancer cell9
Rhabdomyosarcoma8
neuroblastoma cell8
B-lymphoblastoid cell line6
primary cell
mammary epithelial cell3
acute myeloid leukemia cell2
foreskin fibroblast2
keratinocyte2
mantle cell lymphoma cell2
tissue
brain3
kidney2
liver2
placenta2
prostate gland2
in vitro differentiated cells
neuroblastoma cell line6
T-cell acute lymphoblastic leukemia5
rhabdomyosarcoma cell4
pancreatic ductal adenocarcinoma3
B cell2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego