Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
161
candidate regulatory elements
156
target gene predictions
91
chromatin state
50
accessible chromatin
30
gene expression
26
binding sites
16
histone modifications
12
differential activity
12
variant allelic effects
10
eQTL
9
Fine-mapped variants
3
caQTL
Date released
78
September, 2022
56
February, 2024
11
May, 2021
9
May, 2020
9
November, 2021
5
March, 2020
Available data
166
bed bed3+
Organism
168
Homo sapiens
Biosample type
78
tissue
63
cell line
27
primary cell
Organ
163
epithelium
94
connective tissue
93
brain
91
kidney
87
musculature of body
84
embryo
79
lung
76
intestine
59
heart
58
uterus
57
bodily fluid
57
limb
55
blood
55
pancreas
46
vasculature
45
skin of body
44
large intestine
36
extraembryonic component
34
blood vessel
32
stomach
25
liver
23
small intestine
22
adrenal gland
20
mammary gland
17
placenta
16
adipose tissue
16
bone element
16
prostate gland
16
ureter
14
thymus
12
artery
12
esophagus
11
eye
11
gonad
11
penis
10
pituitary gland
9
lymph node
9
spinal cord
8
spleen
7
ovary
7
thyroid gland
6
lymphoid tissue
5
nerve
5
vein
4
bronchus
4
mouth
4
testis
3
bone marrow
3
breast
3
lymphatic vessel
3
skeleton
3
urinary bladder
2
tongue
2
vagina
1
nose
Project
159
AMP
9
ENCODE
Genome assembly (visualization)
166
hg19
62
GRCh38
BIOSAMPLE
TYPE
168 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
variant allelic effects
tissue
small intestine
17
large intestine
14
sigmoid colon
7
coronary artery
3
2
transverse colon
5
+ See 12 more…
cell line
HeLa-S3
55
HCT116
3
HT-29
2
HCT-116 cell
1
SW480
1
+ See 1 more…
primary cell
endothelial cell of umbilical vein
4
1
colon epithelial cell
3
enterocyte
3
dermis blood vessel endothelial cell
2
enteric smooth muscle cell
2
+ See 11 more…
See all biosamples
Download