Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1382candidate regulatory elements
  • 958target gene predictions
  • 753chromatin state
  • 750accessible chromatin
  • 668gene expression
  • 393histone modifications
  • 179eQTL
  • 174binding sites
  • 162differential activity
  • 137variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 655September, 2022
  • 111November, 2021
  • 91May, 2021
  • 40March, 2020
  • 28January, 2021
  • 18May, 2020
  • 6February, 2024
  • 5September, 2023
  • 2February, 2021
  • 1January, 2020
  • 1January, 2022
Available data
  • 958bed bed3+
  • 3bigBed narrowPeak
  • 3bigWig
Organism
  • 958Homo sapiens
Collection Tags
  • 654EpiMap
  • 136DGA
  • 116AMP
  • 112T2DKP
  • 46 T2DKP
  • 45T1D
  • 17BLUEPRINT
  • 64DN
Biosample type
  • 518tissue
  • cell line
  • 372primary cell
  • 65in vitro differentiated cells
  • 3stem cell
Organ
  • 120epithelium
  • 76musculature of body
  • 75connective tissue
  • 68kidney
  • 65intestine
  • 54brain
  • 52lung
  • 49heart
  • 48limb
  • 39pancreas
  • 36large intestine
  • 35extraembryonic component
  • 31vasculature
  • 30stomach
  • 29skin of body
  • 25blood vessel
  • 23small intestine
  • 21adrenal gland
  • 20embryo
  • 16liver
  • 16placenta
  • 14thymus
  • 13adipose tissue
  • 13ureter
  • 11mammary gland
  • 10esophagus
  • 10gonad
  • 9spinal cord
  • 8artery
  • 8eye
  • 8spleen
  • 7ovary
  • 7penis
  • 6bone element
  • 6thyroid gland
  • 5prostate gland
  • 4lymphoid tissue
  • 4vein
  • 3bone marrow
  • 3breast
  • 3bronchus
  • 3lymphatic vessel
  • 3mouth
  • 3nerve
  • 3skeleton
  • 3testis
  • 3urinary bladder
  • 3uterus
  • 2tongue
  • 2vagina
  • 1nose
Project
  • 819AMP
  • 111ENCODE
  • 28T1D
Genome assembly (visualization)
  • 958hg19
  • 117GRCh38
biosample_type!
  • cell line
BIOSAMPLE
TYPE

958 results

search-icontable-tab-icon
Clear Filters
target gene predictions
tissue
stomach21
heart20
adrenal gland17
lung17
small intestine17
primary cell
CD14-positive monocyte19
common myeloid progenitor, CD34-positive14
B cell10
pericyte cell10
CD4-positive, alpha-beta memory T cell9
in vitro differentiated cells
hematopoietic multipotent progenitor cell10
adipocyte6
dendritic cell6
neural progenitor cell5
cardiomyocytes (cardiac muscle cell)3
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego