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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2987target gene predictions
  • 2638pQTL
  • 1671candidate regulatory elements
  • 1199accessible chromatin
  • 977histone modifications
  • 943chromatin state
  • 816binding sites
  • 672gene expression
  • 180eQTL
  • 136variant allelic effects
  • 122differential activity
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 1other
  • 1representative DNase hypersensitivity sites
Date released
  • 1661July, 2026
  • 833September, 2022
  • 174February, 2024
  • 139May, 2021
  • 111November, 2021
  • 44March, 2020
  • 18May, 2020
  • 5September, 2023
  • 1January, 2020
  • 1January, 2022
Available data
  • 2987bed bed3+
Organism
  • 2987Homo sapiens
Collection Tags
  • 1458ENCODE-rE2G
  • 833EpiMap
  • 203HDMA
  • 185DGA
  • 1744DN
  • 116AMP
  • 112T2DKP
  • 34 T2DKP
  • 17BLUEPRINT
  • 17T1D
Biosample type
  • 1182tissue
  • 1087primary cell
  • 606cell line
  • 109in vitro differentiated cells
  • 3stem cell
Organ
  • 578blood
  • 343brain
  • 189lung
  • 162kidney
  • 142intestine
  • 126heart
  • 117skin of body
  • 109epithelium
  • 96large intestine
  • 89muscle organ
  • 84embryo
  • 82connective tissue
  • 80musculature of body
  • 68uterus
  • 64extraembryonic component
  • 57bodily fluid
  • 51stomach
  • 50liver
  • 49limb
  • 49pancreas
  • 46adrenal gland
  • 42eye
  • 41placenta
  • 41thymus
  • 38blood vessel
  • 36mammary gland
  • 36small intestine
  • 31vasculature
  • 30bone element
  • 25gonad
  • 25spleen
  • 24prostate gland
  • 22thyroid gland
  • 22ureter
  • 17adipose tissue
  • 16ovary
  • 15spinal cord
  • 13artery
  • 13esophagus
  • 11penis
  • 10pituitary gland
  • 9lymph node
  • 9testis
  • 7skeleton
  • 6lymphoid tissue
  • 6mouth
  • 6urinary bladder
  • 5breast
  • 5vein
  • 4tongue
  • 4vagina
  • 3bronchus
  • 3lymphatic vessel
  • 3nerve
  • 2bone marrow
  • 1embryonic structure
  • 1gallbladder
  • 1nose
Project
  • 2876AMP
  • 111ENCODE
Genome assembly (visualization)
  • 1946GRCh38
  • 1326hg19
lab.title!
  • Kyle Gaulton, UCSD
BIOSAMPLE
TYPE

2987 results

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Clear Filters
target gene predictions
tissue
head of caudate nucleus86
dorsolateral prefrontal cortex57
posterior cingulate gyrus48
stomach42
heart38
primary cell
T-cell64
stimulated activated CD4-positive, alpha-beta T cell55
CD4-positive, alpha-beta T cell52
activated CD4-positive, alpha-beta T cell30
fibroblast28
cell line
HeLa-S359
H1-hESC39
A54933
K56230
HFFc620
in vitro differentiated cells
hematopoietic multipotent progenitor cell22
adipocyte7
dendritic cell6
neural progenitor cell6
endodermal cell4
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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