Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
139
candidate regulatory elements
95
target gene predictions
87
chromatin state
53
histone modifications
49
accessible chromatin
36
Fine-mapped variants
29
eQTL
28
binding sites
19
gene expression
18
variant allelic effects
Date released
74
September, 2022
13
May, 2021
3
November, 2021
3
September, 2023
2
March, 2020
Available data
95
bed bed3+
Organism
95
Homo sapiens
Biosample type
47
tissue
30
cell line
15
primary cell
2
in vitro differentiated cells
1
stem cell
Organ
112
epithelium
84
embryo
80
musculature of body
78
lung
77
connective tissue
76
brain
75
kidney
73
intestine
58
uterus
57
bodily fluid
55
blood
49
heart
49
limb
44
large intestine
44
skin of body
36
extraembryonic component
34
pancreas
31
vasculature
30
stomach
25
blood vessel
23
small intestine
21
adrenal gland
21
liver
19
mammary gland
17
placenta
15
bone element
15
prostate gland
14
thymus
13
adipose tissue
13
ureter
11
gonad
11
penis
10
esophagus
10
pituitary gland
9
eye
9
lymph node
9
spinal cord
8
artery
8
spleen
7
ovary
6
lymphoid tissue
6
thyroid gland
4
mouth
4
testis
4
vein
3
breast
3
bronchus
3
lymphatic vessel
3
nerve
3
skeleton
3
urinary bladder
2
bone marrow
2
tongue
2
vagina
1
nose
Project
92
AMP
3
ENCODE
Genome assembly (visualization)
95
hg19
3
GRCh38
month_released!
January, 2021
BIOSAMPLE
TYPE
95 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
tissue
brain
16
caudate nucleus
3
layer of hippocampus
3
Ammon's horn
2
Brodmann (1909) area 46
2
+ See 15 more…
cell line
pituitary stalk
10
MCF-7
6
SK-N-SH
3
SK-N-DZ
2
T47D
2
+ See 7 more…
primary cell
mammary gland epithelial cell
4
luminal epithelial cell of mammary gland
3
myoepithelial cell of mammary gland
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 4 more…
in vitro differentiated cells
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download