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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2974target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • 1248accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 816binding sites
  • 674gene expression
  • 484differential activity
  • 180eQTL
  • 141variant allelic effects
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 2Fine-mapped variants
  • 1representative DNase hypersensitivity sites
Date released
  • 1661July, 2026
  • 834September, 2022
  • 174February, 2024
  • 139May, 2021
  • 111November, 2021
  • March, 2020
  • 28January, 2021
  • 18May, 2020
  • 5September, 2023
  • 2February, 2021
  • 1January, 2020
  • 1January, 2022
Available data
  • 2974bed bed3+
  • 3bigBed narrowPeak
  • 3bigWig
Organism
  • 2974Homo sapiens
Collection Tags
  • 1458ENCODE-rE2G
  • 833EpiMap
  • 203HDMA
  • 1744DN
  • 144DGA
  • 116AMP
  • 112T2DKP
  • 45T1D
  • 40 T2DKP
  • 17BLUEPRINT
Biosample type
  • 1153tissue
  • 1117primary cell
  • 602cell line
  • 101in vitro differentiated cells
  • 1stem cell
Organ
  • 578blood
  • 341brain
  • 188lung
  • 162kidney
  • 140intestine
  • 120epithelium
  • 120heart
  • 117skin of body
  • 95large intestine
  • 89muscle organ
  • 83embryo
  • 80connective tissue
  • 77musculature of body
  • 68uterus
  • 64extraembryonic component
  • 59pancreas
  • 57bodily fluid
  • 50stomach
  • 49limb
  • 47liver
  • 45adrenal gland
  • 42eye
  • 41placenta
  • 40thymus
  • 36mammary gland
  • 35blood vessel
  • 35small intestine
  • 31bone element
  • 28vasculature
  • 24gonad
  • 24prostate gland
  • 24spleen
  • 22thyroid gland
  • 22ureter
  • 15adipose tissue
  • 15ovary
  • 15spinal cord
  • 13artery
  • 12esophagus
  • 11penis
  • 10pituitary gland
  • 9lymph node
  • 9testis
  • 7skeleton
  • 6lymphoid tissue
  • 6mouth
  • 5breast
  • 5urinary bladder
  • 4tongue
  • 4vagina
  • 4vein
  • 3bone marrow
  • 3bronchus
  • 3lymphatic vessel
  • 3nerve
  • 1embryonic structure
  • 1gallbladder
  • 1nose
Project
  • 2835AMP
  • 111ENCODE
  • 28T1D
Genome assembly (visualization)
  • 1946GRCh38
  • 1313hg19
month_released!
  • March, 2020
BIOSAMPLE
TYPE

2974 results

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Clear Filters
target gene predictions
tissue
head of caudate nucleus86
dorsolateral prefrontal cortex56
posterior cingulate gyrus48
stomach42
heart37
primary cell
T-cell64
stimulated activated CD4-positive, alpha-beta T cell55
CD4-positive, alpha-beta T cell52
activated CD4-positive, alpha-beta T cell31
fibroblast28
cell line
HeLa-S359
H1-hESC39
A54933
K56230
HFFc620
in vitro differentiated cells
hematopoietic multipotent progenitor cell22
adipocyte7
dendritic cell6
neural progenitor cell5
endodermal cell4
stem cell
undifferentiated ESC (H9 cell line)1
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