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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1200
target gene predictions
936
chromatin state
863
histone modifications
833
accessible chromatin
817
binding sites
593
gene expression
168
eQTL
167
differential activity
74
Fine-mapped variants
61
variant allelic effects
13
caQTL
4
variant to gene
3
pQTL
2
sQTL
1
other
1
representative DNase hypersensitivity sites
Date released
834
September, 2022
174
February, 2024
May, 2021
111
November, 2021
44
March, 2020
28
January, 2021
May, 2020
5
September, 2023
2
February, 2021
1
January, 2020
1
January, 2022
Available data
1200
bed bed3+
3
bigBed narrowPeak
3
bigWig
Organism
1200
Homo sapiens
Biosample type
489
tissue
351
cell line
310
primary cell
47
in vitro differentiated cells
3
stem cell
Organ
112
epithelium
79
embryo
75
kidney
74
lung
74
musculature of body
67
intestine
65
brain
64
connective tissue
56
uterus
53
bodily fluid
51
blood
46
heart
46
limb
39
large intestine
39
skin of body
37
pancreas
33
extraembryonic component
28
stomach
28
vasculature
22
blood vessel
22
small intestine
19
adrenal gland
18
liver
17
mammary gland
16
placenta
15
bone element
13
prostate gland
13
ureter
12
thymus
10
adipose tissue
10
esophagus
10
gonad
10
penis
9
eye
8
lymph node
8
spinal cord
7
spleen
6
artery
6
lymphoid tissue
6
ovary
5
thyroid gland
4
mouth
4
testis
3
bronchus
3
lymphatic vessel
3
nerve
3
skeleton
3
urinary bladder
3
vein
2
bone marrow
2
breast
2
tongue
2
vagina
1
nose
Project
1061
AMP
111
ENCODE
28
T1D
Genome assembly (visualization)
1200
hg19
285
GRCh38
month_released!
May, 2020
May, 2021
BIOSAMPLE
TYPE
1200 results
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Clear Filters
target gene predictions
tissue
heart
20
stomach
19
lung
17
brain
16
muscle of arm
16
+ See 108 more…
cell line
HeLa-S3
54
H1-hESC
38
K562
22
HFFc6
19
A549
18
+ See 152 more…
primary cell
common myeloid progenitor, CD34-positive
13
pericyte cell
10
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
+ See 156 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
neural progenitor cell
5
cardiomyocytes (cardiac muscle cell)
3
adipocyte
2
endodermal cell
2
+ See 23 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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