Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
207
candidate regulatory elements
130
target gene predictions
104
chromatin state
41
accessible chromatin
26
binding sites
22
histone modifications
19
eQTL
18
gene expression
7
variant allelic effects
6
Fine-mapped variants
2
differential activity
Date released
97
September, 2022
14
May, 2021
13
November, 2021
4
March, 2020
2
February, 2024
Available data
130
bed bed3+
Organism
130
Homo sapiens
Biosample type
72
tissue
34
primary cell
23
cell line
1
in vitro differentiated cells
Organ
122
epithelium
84
embryo
80
musculature of body
78
connective tissue
78
lung
76
brain
75
kidney
73
intestine
58
uterus
57
bodily fluid
55
blood
49
heart
49
limb
44
large intestine
44
pancreas
44
skin of body
36
extraembryonic component
31
vasculature
30
stomach
25
blood vessel
23
small intestine
21
adrenal gland
21
liver
19
mammary gland
17
placenta
16
bone element
15
prostate gland
14
thymus
13
adipose tissue
13
ureter
11
gonad
11
penis
10
esophagus
10
pituitary gland
9
eye
9
lymph node
9
spinal cord
8
artery
8
spleen
7
ovary
6
lymphoid tissue
6
thyroid gland
4
mouth
4
testis
4
vein
3
bone marrow
3
breast
3
bronchus
3
lymphatic vessel
3
nerve
3
skeleton
3
urinary bladder
2
tongue
2
vagina
1
nose
Project
117
AMP
13
ENCODE
Genome assembly (visualization)
130
hg19
15
GRCh38
BIOSAMPLE
TYPE
130 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
tissue
small intestine
17
large intestine
14
adipose tissue
8
sigmoid colon
7
transverse colon
5
+ See 12 more…
primary cell
keratinocyte
5
fibroblast of dermis
4
foreskin keratinocyte
4
colon epithelial cell
3
skin fibroblast
3
+ See 11 more…
cell line
HCT116
3
HT-29
2
iPS DF 19.11
2
COLO829
1
GM23248
1
+ See 14 more…
in vitro differentiated cells
white adipose cell
1
See all biosamples
Download