Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
98
candidate regulatory elements
68
target gene predictions
55
chromatin state
37
accessible chromatin
26
gene expression
21
binding sites
20
histone modifications
10
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
49
September, 2022
8
May, 2021
5
November, 2021
4
March, 2020
2
February, 2024
Available data
68
bed bed3+
Organism
68
Homo sapiens
Biosample type
44
tissue
13
cell line
10
primary cell
1
in vitro differentiated cells
Organ
122
epithelium
84
embryo
80
musculature of body
78
connective tissue
78
lung
76
brain
75
kidney
73
intestine
58
uterus
57
bodily fluid
55
blood
49
heart
49
limb
44
large intestine
44
pancreas
44
skin of body
36
extraembryonic component
31
vasculature
30
stomach
25
blood vessel
23
small intestine
21
adrenal gland
21
liver
19
mammary gland
17
placenta
16
bone element
15
prostate gland
14
thymus
13
adipose tissue
13
ureter
11
gonad
11
penis
10
esophagus
10
pituitary gland
9
eye
9
lymph node
9
spinal cord
8
artery
8
spleen
7
ovary
6
lymphoid tissue
6
thyroid gland
4
mouth
4
testis
4
vein
3
bone marrow
3
breast
3
bronchus
3
lymphatic vessel
3
nerve
3
skeleton
3
urinary bladder
2
tongue
2
vagina
1
nose
Project
63
AMP
5
ENCODE
Genome assembly (visualization)
68
hg19
7
GRCh38
BIOSAMPLE
TYPE
68 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
tissue
large intestine
14
liver
10
sigmoid colon
7
transverse colon
5
colonic mucosa
2
+ See 4 more…
cell line
HCT116
3
HepG2
3
HT-29
2
HCT-116 cell
1
HuH-7
1
+ See 3 more…
primary cell
colon epithelial cell
3
hepatocyte
3
bronchial epithelial cell
2
club cell
1
hepatic stellate cell
1
in vitro differentiated cells
hepatocyte
1
See all biosamples
Download