Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
304
accessible chromatin
304
gene expression
215
candidate regulatory elements
210
target gene predictions
109
chromatin state
106
differential activity
77
binding sites
57
variant allelic effects
54
histone modifications
27
eQTL
6
Fine-mapped variants
4
caQTL
2
pQTL
Date released
97
September, 2022
67
November, 2021
24
May, 2021
11
January, 2021
6
March, 2020
2
February, 2021
2
September, 2023
1
May, 2020
Available data
210
bed bed3+
3
bigBed narrowPeak
3
bigWig
Organism
210
Homo sapiens
Biosample type
164
primary cell
26
tissue
13
in vitro differentiated cells
6
cell line
1
stem cell
Organ
122
epithelium
84
embryo
80
musculature of body
78
connective tissue
78
lung
76
brain
75
kidney
73
intestine
58
uterus
57
bodily fluid
55
blood
49
heart
49
limb
44
large intestine
44
pancreas
44
skin of body
36
extraembryonic component
31
vasculature
30
stomach
25
blood vessel
23
small intestine
21
adrenal gland
21
liver
19
mammary gland
17
placenta
16
bone element
15
prostate gland
14
thymus
13
adipose tissue
13
ureter
11
gonad
11
penis
10
esophagus
10
pituitary gland
9
eye
9
lymph node
9
spinal cord
8
artery
8
spleen
7
ovary
6
lymphoid tissue
6
thyroid gland
4
mouth
4
testis
4
vein
3
bone marrow
3
breast
3
bronchus
3
lymphatic vessel
3
nerve
3
skeleton
3
urinary bladder
2
tongue
2
vagina
1
nose
Project
132
AMP
67
ENCODE
11
T1D
Genome assembly (visualization)
210
hg19
67
GRCh38
BIOSAMPLE
TYPE
210 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
primary cell
pericyte cell
10
endothelial cell
7
keratinocyte
5
endothelial cell of umbilical vein
4
fibroblast
4
+ See 85 more…
tissue
adipose tissue
8
ovary
6
breast epithelium
3
testis
3
esophagus squamous epithelium
2
+ See 3 more…
in vitro differentiated cells
adipocyte
6
mesenchymal stem cell
3
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
hepatocyte
1
+ See 1 more…
cell line
EndoC_BH1
1
GM23248
1
HT1080
1
NT2-D1 cell
1
colon epithelial cell
1
+ See 1 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download