Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1330target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 817binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 834September, 2022
  • 174February, 2024
  • 139May, 2021
  • 111November, 2021
  • 28January, 2021
  • 18May, 2020
  • 17March, 2020
  • 5September, 2023
  • 2February, 2021
  • 1January, 2020
  • 1January, 2022
Available data
  • 1330bed bed3+
  • 3bigBed narrowPeak
  • 3bigWig
Organism
  • 1330Homo sapiens
Collection Tags
  • 833EpiMap
  • 1744DN
  • 161DGA
  • 116AMP
  • 112T2DKP
  • 47 T2DKP
  • 45T1D
  • 17BLUEPRINT
Biosample type
  • 497tissue
  • 397cell line
  • 372primary cell
  • 63in vitro differentiated cells
  • 1stem cell
Organ
  • 122epithelium
  • 83embryo
  • 79musculature of body
  • 77lung
  • 76connective tissue
  • 75kidney
  • 74brain
  • 71intestine
  • 58uterus
  • 57bodily fluid
  • 55blood
  • 49limb
  • 46heart
  • 44skin of body
  • 43large intestine
  • 43pancreas
  • 36extraembryonic component
  • 30vasculature
  • 29stomach
  • 24blood vessel
  • 22small intestine
  • 20adrenal gland
  • 20liver
  • 19mammary gland
  • 17placenta
  • 16bone element
  • 15prostate gland
  • 13thymus
  • 13ureter
  • 12adipose tissue
  • 11penis
  • 10gonad
  • 10pituitary gland
  • 9esophagus
  • 9eye
  • 9lymph node
  • 9spinal cord
  • 8artery
  • 7spleen
  • 6lymphoid tissue
  • 6ovary
  • 6thyroid gland
  • 4mouth
  • 4testis
  • 4vein
  • 3bone marrow
  • 3breast
  • 3bronchus
  • 3lymphatic vessel
  • 3nerve
  • 3skeleton
  • 2tongue
  • 2urinary bladder
  • 2vagina
  • 1nose
Project
  • 1191AMP
  • 111ENCODE
  • 28T1D
Genome assembly (visualization)
  • 1330hg19
  • 285GRCh38
software_used.software.name!
  • nospecificsoft_customcode
BIOSAMPLE
TYPE

1330 results

search-icontable-tab-icon
Clear Filters
target gene predictions
tissue
stomach21
heart20
adrenal gland16
brain16
lung16
cell line
HeLa-S355
H1-hESC39
K56223
A54919
HFFc619
primary cell
CD14-positive monocyte19
common myeloid progenitor, CD34-positive14
B cell10
pericyte cell10
CD4-positive, alpha-beta memory T cell9
in vitro differentiated cells
hematopoietic multipotent progenitor cell10
adipocyte6
dendritic cell6
neural progenitor cell4
cardiomyocytes (cardiac muscle cell)3
stem cell
undifferentiated ESC (H9 cell line)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego