Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 876candidate regulatory elements
  • 817binding sites
  • 524target gene predictions
  • 186eQTL
  • 141variant allelic effects
  • 130differential activity
  • 84Fine-mapped variants
  • 15gene expression
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 174February, 2024
  • 139May, 2021
  • 111November, 2021
  • 44March, 2020
  • 28January, 2021
  • 18May, 2020
  • 5September, 2023
  • 2February, 2021
  • 1January, 2020
  • 1January, 2022
  • 1September, 2022
Available data
  • 524bed bed3+
  • 3bigBed narrowPeak
  • 3bigWig
Organism
  • 524Homo sapiens
Collection Tags
  • 188DGA
  • 1744DN
  • 116AMP
  • 112T2DKP
  • 51 T2DKP
  • 45T1D
  • 17BLUEPRINT
Biosample type
  • 220cell line
  • 212primary cell
  • 59tissue
  • 30in vitro differentiated cells
  • 3stem cell
Organ
  • 74epithelium
  • 57embryo
  • 54uterus
  • 38connective tissue
  • 32blood
  • 32bodily fluid
  • 31pancreas
  • 18intestine
  • 16brain
  • 13heart
  • 12musculature of body
  • 11large intestine
  • 10pituitary gland
  • 10skin of body
  • 8lung
  • 7adrenal gland
  • 7liver
  • 7stomach
  • 7vasculature
  • 6blood vessel
  • 5adipose tissue
  • 5mammary gland
  • 4small intestine
  • 3esophagus
  • 3extraembryonic component
  • 3gonad
  • 3limb
  • 3ovary
  • 3thymus
  • 2artery
  • 2bone element
  • 2bone marrow
  • 2prostate gland
  • 2spleen
  • 2thyroid gland
  • 2vein
  • 1breast
  • 1bronchus
  • 1lymph node
  • 1lymphatic vessel
  • 1lymphoid tissue
  • 1penis
  • 1placenta
  • 1spinal cord
  • 1urinary bladder
Project
  • 385AMP
  • 111ENCODE
  • 28T1D
Genome assembly (visualization)
  • 524hg19
  • 285GRCh38
software_used.software.name!
  • r
BIOSAMPLE
TYPE

524 results

search-icontable-tab-icon
Clear Filters
target gene predictions
cell line
HeLa-S352
H1-hESC38
HFFc619
K56217
pituitary stalk10
primary cell
CD14-positive monocyte15
pericyte cell9
endothelial cell7
olfactory receptor cell6
smooth muscle cell6
tissue
psoas muscle4
adrenal gland3
liver3
pancreas3
thymus3
in vitro differentiated cells
dendritic cell6
adipocyte4
cardiomyocytes (cardiac muscle cell)3
lymphocyte of B lineage (iPSC)2
ESC dervived hypothalamic neuron (arcuate nucleus)1
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego