Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 888histone modifications
  • 839target gene predictions
  • 781binding sites
  • 772candidate regulatory elements
  • 716accessible chromatin
  • 573gene expression
  • 433chromatin state
  • 162differential activity
  • 92variant allelic effects
  • 60eQTL
  • 11caQTL
  • 5hQTL
  • 5sQTL
  • 3meQTL
  • 2Fine-mapped variants
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 56February, 2024
  • 31May, 2020
  • 3October, 2022
  • 1February, 2021
  • 1February, 2023
Available data
  • 87bed bed3+
  • 4bigBed narrowPeak
  • 4bigWig
Organism
  • 91Homo sapiens
Collection Tags
  • 85DGA
  • 10 T2DKP
  • 4T2DKP
  • 3CMDGA
  • 1AMP
Biosample type
  • 81primary cell
  • tissue
  • 6in vitro differentiated cells
  • 4cell line
Organ
  • 41epithelium
  • 13connective tissue
  • 9vasculature
  • 8pancreas
  • 7brain
  • 7kidney
  • 4liver
  • 3blood vessel
  • 3intestine
  • 3musculature of body
  • 2esophagus
  • 2stomach
  • 1adrenal gland
  • 1bronchus
  • 1eye
  • 1lung
  • 1mammary gland
  • 1prostate gland
  • 1skin of body
  • 1thyroid gland
  • 1vein
Project
  • 91AMP
  • 1T1D
Genome assembly (visualization)
  • 87hg19
biosample_type!
  • tissue
BIOSAMPLE
TYPE

92 results

search-icontable-tab-icon
Clear Filters
variant allelic effects
primary cell
fibroblast6
enterocyte3
macrophage3
myofibroblast cell3
cardiac fibroblast2
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)2
Adipose SGBS cell line (adipocyte)1
Preadipose SGBS cell line (adipocyte)1
cardiac precursors (cardiac muscle cell)1
cardiomyocytes (cardiac muscle cell)1
cell line
MIN62
EndoC_BH11
glomerular visceral epithelial cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego