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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2768target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • 1004accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • 685gene expression
  • 484differential activity
  • 180eQTL
  • 124variant allelic effects
  • 74Fine-mapped variants
  • 21caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2580February, 2021
  • 2508September, 2022
  • 1984July, 2026
  • 356February, 2024
  • 320May, 2026
  • 289June, 2020
  • 286September, 2023
  • 224May, 2021
  • 222November, 2021
  • 128March, 2020
  • 103August, 2021
  • 102January, 2022
  • 99October, 2022
  • 91May, 2020
  • 84January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 47May, 2022
  • 40May, 2024
  • 35August, 2017
  • 30March, 2024
  • 21July, 2025
  • 19April, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 6February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 7572bed bed3+
  • 3551tsv
  • 869bed bed9
  • 389bigWig
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 12445Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 964ENCODE
  • 447DGA
  • 400AMP
  • 397T1D
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 281T2DKP
  • 206BLUEPRINT
  • 1744DN
  • 151GTEx
  • 141 T2DKP
  • 133CATlas
  • 111T2D
  • 101eQTLCatalogue
  • 67HPAP
  • 26FNIH_projects-heart
  • 23CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5834tissue
  • 3664primary cell
  • 2500cell line
  • 444in vitro differentiated cells
  • 4stem cell
Organ
  • 3361blood
  • 2883vasculature
  • 2849bodily fluid
  • 2843blood vessel
  • 2658vein
  • 891brain
  • 833epithelium
  • 742kidney
  • 471heart
  • 465connective tissue
  • 433lung
  • 373musculature of body
  • 344intestine
  • 286skin of body
  • 284pancreas
  • 232limb
  • 221liver
  • 218large intestine
  • 210embryo
  • 171extraembryonic component
  • 134stomach
  • 132adipose tissue
  • 114eye
  • 111muscle organ
  • 99mammary gland
  • 97bone element
  • 96adrenal gland
  • 96placenta
  • 94small intestine
  • 92thymus
  • 90uterus
  • 85prostate gland
  • 77artery
  • 73ureter
  • 63penis
  • 62gonad
  • 61lymph node
  • 61spleen
  • 60__MARKER__
  • 48spinal cord
  • 46esophagus
  • 45thyroid gland
  • 31testis
  • 30ovary
  • 24lymphoid tissue
  • 23nerve
  • 21mouth
  • 20lymphatic vessel
  • 15bronchus
  • 15skeleton
  • 14breast
  • 13bone marrow
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11847AMP
  • 281KPMP
  • 222ENCODE
  • 57T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6509hg19
  • 3695GRCh38
  • 4hg18
annotation_type_category!
  • ATAC-seq
BIOSAMPLE
TYPE

12448 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
accessible chromatin
histone modifications
chromatin state
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart383741211412
stomach4040311911
kidney282932161711
brain302923181121
primary cell
monocyte238611544121
fibroblast2434011026
endothelial cell1132212925223
macrophage12321217832
CD8-positive, alpha-beta T cell24723013
cell line
A549322111182
HeLa-S358531
H1-hESC38111128
K5622971172
MCF-71291253
in vitro differentiated cells
hematopoietic multipotent progenitor cell2219111011
neural progenitor cell651547
adipocyte3411611
cardiomyocytes11
mesenchymal stem cell331121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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