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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
total RNA-seq
4
ATAC-seq
2
pCHi-C
Assay category
11
Transcription
3D chromatin structure
4
DNA accessibility
DNA binding
Date released
569
February, 2021
233
May, 2020
193
May, 2021
164
July, 2018
131
June, 2019
101
August, 2017
82
July, 2019
49
April, 2018
46
November, 2019
45
February, 2023
40
September, 2018
38
May, 2022
34
October, 2019
29
August, 2021
17
March, 2020
15
February, 2018
10
November, 2018
7
October, 2017
6
November, 2020
5
December, 2019
5
January, 2019
5
September, 2017
3
August, 2018
3
June, 2018
2
January, 2018
2
March, 2019
2
October, 2018
1
May, 2023
Available data
15
bigWig
13
tsv
11
bam
2
bedpe bed3+
2
ibed
Organism
17
Homo sapiens
Biosample type
7
tissue
6
cell line
4
in vitro differentiated cells
Organ
7
pancreas
4
epithelium
2
heart
musculature of body
1
blood vessel
1
liver
1
vasculature
Project
15
AMP
2
T1D
Genome assembly (visualization)
17
hg19
11
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_slims!
3D chromatin structure
DNA binding
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
17 results
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total RNA-seq
ATAC-seq
pCHi-C
tissue
islet of Langerhans
2
aorta
1
heart left ventricle
1
heart right ventricle
1
liver
1
+ See 1 more…
cell line
EndoC_BH1
2
2
early embryonic cell
2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
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