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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
8
ATAC-seq
4
DNase-seq
1
FAIRE-seq
Assay category
54
Transcription
DNA binding
13
DNA accessibility
3D chromatin structure
Date released
60
February, 2021
3
October, 2019
2
July, 2019
2
June, 2019
Available data
67
bam
59
bigWig
54
tsv
13
bed narrowPeak
5
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
tar
Organism
67
Homo sapiens
Biosample type
60
cell line
tissue
7
primary cell
Organ
372
epithelium
335
pancreas
70
vasculature
69
heart
67
blood vessel
62
artery
57
connective tissue
30
kidney
30
liver
15
embryo
9
blood
9
bodily fluid
9
brain
4
musculature of body
3
adipose tissue
3
vein
2
eye
1
bone element
1
bone marrow
1
mammary gland
1
pericardium
Project
67
AMP
Genome assembly (visualization)
66
GRCh38
66
hg19
Lab
67
AMP-T2D consortium
assay_slims!
3D chromatin structure
DNA binding
biosample_type!
tissue
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
67 results
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total RNA-seq
ATAC-seq
DNase-seq
FAIRE-seq
cell line
smooth muscle cell of the coronary artery
52
8
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
endothelial cell of coronary artery
1
kidney capillary endothelial cell
1
smooth muscle cell of the coronary artery
1
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