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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
total RNA-seq
26
ATAC-seq
Assay category
DNA binding
35
Transcription
26
DNA accessibility
3D chromatin structure
Date released
618
February, 2021
291
May, 2020
234
May, 2021
216
August, 2021
198
February, 2023
193
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
100
July, 2019
67
October, 2019
59
September, 2020
51
March, 2020
49
April, 2018
47
September, 2023
46
November, 2019
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
September, 2017
4
August, 2018
4
March, 2019
4
March, 2023
3
June, 2018
2
October, 2018
1
August, 2022
Available data
61
bam
35
bigWig
35
tsv
26
bed narrowPeak
15
fastq
Organism
61
Homo sapiens
Biosample type
39
tissue
20
in vitro differentiated cells
2
cell line
Organ
40
pancreas
4
embryo
2
epithelium
1
adipose tissue
1
connective tissue
Project
61
AMP
Genome assembly (visualization)
61
GRCh38
61
hg19
Lab
61
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_slims!
3D chromatin structure
DNA binding
files.file_type!
txt
BIOSAMPLE
ASSAY
61 results
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total RNA-seq
ATAC-seq
tissue
islet of Langerhans
19
19
adipose tissue(adipose white tissue)
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
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cell line
EndoC_BH1
1
1
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