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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
200
DNase-seq
27
ATAC-seq
4
FAIRE-seq
Assay category
DNA binding
231
DNA accessibility
Date released
187
June, 2019
14
September, 2018
12
October, 2019
10
August, 2017
November, 2018
5
September, 2017
2
July, 2019
1
November, 2020
Available data
1797
bam
1757
bigWig
1600
tsv
482
bed narrowPeak
482
fastq
231
bigBed narrowPeak
206
bed bed3+
199
bed broadPeak
197
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
29
bed bedMethyl
29
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
7
csv
3
bedpe bed3+
2
ibed
1
tar
1
vcf
Organism
231
Homo sapiens
Biosample type
174
tissue
52
primary cell
3
in vitro differentiated cells
2
cell line
Organ
80
kidney
40
epithelium
36
limb
33
musculature of body
31
brain
30
heart
29
pancreas
18
ureter
12
connective tissue
12
vasculature
10
blood vessel
4
artery
4
eye
3
adipose tissue
3
liver
3
vein
2
nerve
Project
231
AMP
Genome assembly (visualization)
222
GRCh38
208
hg19
Lab
231
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_slims!
3D chromatin structure
DNA binding
month_released!
November, 2018
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
231 results
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Clear Filters
DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart
18
muscle of arm
17
kidney
13
1
muscle of leg
13
brain
12
+ See 40 more…
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cardiac fibroblast
3
+ See 22 more…
in vitro differentiated cells
adipocyte
1
2
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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