Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
small RNA-seq
4
total RNA-seq
3
single cell RNA-seq
2
RRBS
1
ATAC-seq
1
FAIRE-seq
Assay category
11
Transcription
3D chromatin structure
2
DNA accessibility
2
DNA methylation
Target of assay
3
control
Date released
91
November, 2017
86
October, 2019
30
June, 2019
28
May, 2019
16
October, 2017
15
July, 2019
12
February, 2020
2
March, 2020
2
November, 2018
1
February, 2023
Available data
13
bam
13
bigWig
11
tsv
2
bed bedMethyl
2
bigBed bedMethyl
1
bed narrowPeak
1
bigBed narrowPeak
Organism
15
Homo sapiens
Biosample type
11
tissue
4
primary cell
Organ
25
heart
17
connective tissue
15
brain
12
adipose tissue
11
epithelium
11
kidney
10
vasculature
9
blood vessel
9
liver
6
musculature of body
6
pancreas
3
artery
2
pericardium
1
eye
1
limb
Project
15
AMP
Genome assembly (visualization)
14
hg19
12
GRCh38
Lab
15
AMP-T2D consortium
assay_slims!
3D chromatin structure
DNA sequencing
BIOSAMPLE
ASSAY
15 results
search-icon
table-tab-icon
Clear Filters
small RNA-seq
total RNA-seq
single cell RNA-seq
RRBS
ATAC-seq
FAIRE-seq
tissue
frontal cortex
1
1
1
diencephalon
1
1
temporal lobe
1
1
brain
1
cerebellum
1
+ See 2 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
choroid plexus epithelial cell
1
See all biosamples
Download