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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
36
DNase-seq
8
ATAC-seq
1
WGBS
Assay category
66
DNA binding
44
DNA accessibility
Transcription
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
65
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
1
July, 2019
Available data
110
bam
92
bed narrowPeak
87
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
111
Homo sapiens
Biosample type
111
tissue
Organ
593
liver
458
pancreas
315
epithelium
259
brain
228
kidney
224
heart
201
connective tissue
164
vasculature
158
blood vessel
111
limb
97
bone element
89
adipose tissue
83
artery
81
musculature of body
69
blood
69
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
20
vein
18
ureter
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
111
AMP
Genome assembly (visualization)
92
GRCh38
92
hg19
Lab
111
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
3D chromatin structure
Transcription
assay_title!
whole genome sequencing assay
month_released!
August, 2018
BIOSAMPLE
ASSAY
111 results
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ChIP-seq
DNase-seq
ATAC-seq
WGBS
tissue
tibial nerve
35
2
1
tibial artery
23
2
1
muscle of leg
7
13
1
muscle of arm
17
distal epiphysis of femur
1
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