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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
45
ATAC-seq
ChIP-seq
DNase-seq
2
single cell RNA-seq
Assay category
58
Transcription
45
DNA accessibility
Date released
60
February, 2021
35
February, 2023
3
July, 2019
2
August, 2021
2
February, 2020
1
October, 2019
Available data
64
bam
58
tsv
56
bigWig
45
bed narrowPeak
Organism
103
Homo sapiens
Biosample type
60
cell line
41
tissue
2
primary cell
Organ
711
pancreas
521
connective tissue
416
adipose tissue
368
epithelium
229
liver
226
heart
220
kidney
159
bone element
118
vasculature
117
blood vessel
103
artery
52
eye
33
brain
20
lung
18
musculature of body
16
limb
16
skeleton
15
embryo
9
blood
9
bodily fluid
6
nerve
4
spleen
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
103
AMP
Genome assembly (visualization)
99
GRCh38
64
hg19
Lab
103
AMP-T2D consortium
assay_slims!
3D chromatin structure
assay_title!
ChIP-seq
DNase-seq
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
103 results
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total RNA-seq
ATAC-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
8
tissue
coronary artery
1
36
pulmonary artery
2
tibial artery
1
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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