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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
DNase-seq
2
ChIP-seq
1
RRBS
Assay category
27
DNA accessibility
2
DNA binding
1
DNA methylation
Target of assay
1
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
27
February, 2023
2
June, 2019
1
July, 2019
Available data
29
bed narrowPeak
2
bam
2
bigBed narrowPeak
2
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
30
Homo sapiens
Biosample type
27
tissue
3
primary cell
Organ
643
pancreas
603
liver
580
connective tissue
424
adipose tissue
292
epithelium
158
heart
150
vasculature
146
blood vessel
139
brain
89
artery
70
bone element
60
limb
56
kidney
55
blood
55
bodily fluid
38
musculature of body
30
eye
29
embryo
29
nerve
13
spleen
13
vein
12
skeleton
2
pericardium
1
pituitary gland
Project
30
AMP
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
30
AMP-T2D consortium
assay_slims!
3D chromatin structure
assay_title!
DNase-seq
lab.title!
Bing Ren, UCSD
BIOSAMPLE
ASSAY
30 results
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ATAC-seq
ChIP-seq
RRBS
tissue
retina
15
pigmented layer of retina
12
primary cell
retinal pigment epithelial cell
2
1
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