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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
Assay category
7
DNA accessibility
Date released
4
February, 2021
3
February, 2023
Available data
2504
bam
2337
bigWig
1421
tsv
1143
bed narrowPeak
884
fastq
478
bigBed narrowPeak
312
tagAlign
161
txt
153
zippedFastqFolder
64
xls
58
bed broadPeak
57
bed bed3+
32
bed bedMethyl
32
bigBed bedMethyl
21
bigBed broadPeak
11
bed bed3
7
bed bedgraph
7
csv
3
bedpe bed3+
2
ibed
1
tagAlign bed3+
1
tar
Organism
7
Homo sapiens
Biosample type
7
in vitro differentiated cells
Organ
4
connective tissue
Project
7
AMP
Genome assembly (visualization)
7
hg19
Lab
4
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
assay_slims!
3D chromatin structure
assay_title!
DNase-seq
organ_slims!
eye
liver
BIOSAMPLE
ASSAY
7 results
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ATAC-seq
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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