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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
1
ATAC-seq
1
total RNA-seq
Assay category
13
DNA binding
3D chromatin structure
1
DNA accessibility
1
Transcription
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
96
February, 2021
66
November, 2017
43
August, 2021
21
May, 2021
21
October, 2019
15
November, 2019
11
March, 2020
8
January, 2019
6
February, 2023
6
November, 2020
5
November, 2018
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
15
bam
12
bed narrowPeak
12
bigWig
1
tsv
Organism
15
Homo sapiens
Biosample type
39
tissue
15
cell line
5
in vitro differentiated cells
Organ
15
epithelium
15
pancreas
Project
15
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
15
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
assay_slims!
3D chromatin structure
assay_title!
FAIRE-seq
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
ATAC-seq
total RNA-seq
cell line
EndoC_BH1
13
1
1
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