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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
RRBS
11
WGBS
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
65
Transcription
11
DNA methylation
8
DNA accessibility
3D chromatin structure
Target of assay
3
control
Date released
709
February, 2021
406
November, 2017
405
August, 2017
399
May, 2021
341
May, 2020
316
August, 2021
240
October, 2019
205
February, 2023
200
May, 2022
186
June, 2019
168
July, 2018
113
May, 2019
94
December, 2017
88
November, 2018
84
July, 2019
80
April, 2019
76
October, 2018
73
September, 2018
59
November, 2019
59
September, 2020
54
March, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
4
August, 2018
4
March, 2019
4
March, 2023
3
June, 2018
1
August, 2022
1
October, 2022
Available data
81
bam
80
bigWig
65
tsv
7
bed bedMethyl
7
bed narrowPeak
7
bigBed bedMethyl
2
bigBed narrowPeak
Organism
84
Homo sapiens
Biosample type
66
tissue
18
primary cell
Organ
23
heart
16
connective tissue
13
brain
12
adipose tissue
9
blood vessel
9
vasculature
8
liver
7
kidney
5
epithelium
5
musculature of body
4
pancreas
3
artery
limb
1
pericardium
Project
84
AMP
Genome assembly (visualization)
78
GRCh38
72
hg19
Lab
84
AMP-T2D consortium
assay_slims!
3D chromatin structure
assay_title!
RRBS
month_released!
December, 2018
organ_slims!
limb
BIOSAMPLE
ASSAY
84 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
4
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 20 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
+ See 10 more…
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