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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
401
ChIP-seq
232
total RNA-seq
127
single cell RNA-seq
60
ATAC-seq
27
snATAC-seq
15
WGBS
9
DNase-seq
5
GRO-seq
3
RRBS
2
FAIRE-seq
1
pCHi-C
Assay category
9
DNA accessibility
Date released
6
November, 2018
3
August, 2017
Available data
200
bam
200
bed narrowPeak
200
bigBed narrowPeak
200
bigWig
197
bed broadPeak
197
bigBed broadPeak
195
bed bed3+
9
fastq
Organism
9
Homo sapiens
Biosample type
7
tissue
1
in vitro differentiated cells
1
primary cell
Organ
liver
3
pancreas
2
brain
2
connective tissue
1
adipose tissue
1
spleen
Project
9
AMP
Genome assembly (visualization)
9
hg19
8
GRCh38
Lab
9
AMP-T2D consortium
assay_slims!
3D chromatin structure
audit.ERROR.category!
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
9 results
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DNase-seq
tissue
body of pancreas
2
brain
2
islet of Langerhans
1
omental fat pad
1
spleen
1
in vitro differentiated cells
adipocyte
1
primary cell
skeletal muscle myoblast
1
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