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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
total RNA-seq
47
WGBS
39
ATAC-seq
Assay category
53
Transcription
47
DNA methylation
39
DNA accessibility
3D chromatin structure
Date released
80
May, 2022
37
February, 2023
16
September, 2020
6
February, 2021
Available data
80
zippedFastqFolder
71
fastq
bam
6
tsv
Organism
139
Homo sapiens
Biosample type
139
primary cell
69
tissue
27
cell line
Organ
147
epithelium
139
pancreas
8
blood
8
bodily fluid
5
kidney
2
connective tissue
1
bone element
1
bone marrow
1
brain
1
eye
1
heart
1
liver
1
musculature of body
1
vasculature
Project
139
HPAP
Genome assembly (visualization)
GRCh38
Lab
139
Klaus Kaestner, Upenn
assay_slims!
3D chromatin structure
assembly!
GRCh38
files.file_type!
bam
BIOSAMPLE
ASSAY
139 results
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total RNA-seq
WGBS
ATAC-seq
primary cell
pancreatic alpha cell
42
31
22
pancreatic beta cell
11
16
13
pancreatic acinar cell
4
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