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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
3
total RNA-seq
1
pCHi-C
Assay category
19
DNA binding
3D chromatin structure
3
Transcription
Target of assay
17
control
2
histone
2
histone modification
2
narrow histone mark
Date released
17
October, 2019
3
February, 2020
2
May, 2019
1
March, 2020
Available data
18
bam
4
tsv
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
Organism
23
Homo sapiens
Biosample type
22
tissue
1
cell line
Organ
303
pancreas
256
liver
222
epithelium
148
kidney
124
heart
117
connective tissue
93
bone element
67
adipose tissue
66
brain
55
eye
40
vasculature
38
blood vessel
37
musculature of body
22
limb
20
lung
15
blood
15
bodily fluid
13
artery
12
nerve
9
spleen
8
embryo
8
skeleton
8
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
urinary bladder
Project
23
AMP
Genome assembly (visualization)
GRCh38
96
hg19
Lab
23
AMP-T2D consortium
assay_slims!
3D chromatin structure
assembly!
GRCh38
organ_slims!
urinary bladder
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
total RNA-seq
pCHi-C
tissue
tibial nerve
11
1
tibial artery
5
1
muscle of leg
2
gastrocnemius medialis
1
islet of Langerhans
1
cell line
MCF-7
1
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