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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
ChIP-seq
64
ATAC-seq
16
DNase-seq
Assay category
92
DNA binding
80
DNA accessibility
Target of assay
87
histone
87
histone modification
56
broad histone mark
31
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
64
August, 2021
52
November, 2017
40
May, 2024
16
June, 2019
Available data
241
bam
172
bed narrowPeak
156
txt
148
tsv
133
tagAlign
124
bigWig
83
fastq
68
bigBed narrowPeak
64
xls
17
bed broadPeak
16
bed bed3+
16
bigBed broadPeak
15
bed bedMethyl
15
bigBed bedMethyl
6
csv
Organism
172
Homo sapiens
Biosample type
172
tissue
6
primary cell
4
cell line
1
in vitro differentiated cells
Organ
77
heart
65
kidney
62
brain
35
artery
35
blood vessel
vasculature
2
pancreas
Project
172
AMP
Genome assembly (visualization)
783
GRCh38
hg19
Lab
68
AMP-T2D consortium
64
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
assay_slims!
3D chromatin structure
assembly!
hg19
organ_slims!
vasculature
BIOSAMPLE
ASSAY
172 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
kidney
64
left cardiac atrium
40
layer of hippocampus
16
caudate nucleus
11
1
substantia nigra
10
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