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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
14
ChIP-seq
Assay category
32
DNA accessibility
14
DNA binding
Target of assay
11
histone
11
histone modification
7
narrow histone mark
4
broad histone mark
3
RNA binding protein
3
transcription factor
Date released
30
June, 2019
11
November, 2017
3
October, 2017
2
November, 2018
Available data
215
bam
214
bigWig
201
bed narrowPeak
126
bigBed narrowPeak
82
tagAlign
46
bed broadPeak
38
bigBed broadPeak
32
bed bed3+
15
fastq
12
tsv
1
tagAlign bed3+
Organism
46
Homo sapiens
Biosample type
35
tissue
11
primary cell
Organ
78
kidney
49
liver
46
brain
36
limb
33
musculature of body
30
heart
20
epithelium
18
ureter
15
vasculature
14
pancreas
11
blood vessel
9
connective tissue
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
46
AMP
Genome assembly (visualization)
46
GRCh38
37
hg19
Lab
46
AMP-T2D consortium
Audit category:
2
missing controlled_by
assay_slims!
3D chromatin structure
organ_slims!
esophagus
BIOSAMPLE
ASSAY
46 results
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DNase-seq
ChIP-seq
tissue
brain
14
3
caudate nucleus
1
1
frontal cortex
2
middle frontal area 46
2
Ammon's horn
1
+ See 11 more…
primary cell
astrocyte of the cerebellum
1
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
astrocyte of the hippocampus
1
brain pericyte
1
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