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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
1
ATAC-seq
Assay category
35
DNA binding
1
DNA accessibility
Target of assay
35
histone
35
histone modification
20
broad histone mark
15
narrow histone mark
Date released
26
August, 2017
6
November, 2017
4
October, 2017
Available data
2939
bigWig
2926
bam
1591
bed narrowPeak
1337
tsv
1008
fastq
961
bigBed narrowPeak
298
bed broadPeak
bigBed broadPeak
245
bed bed3+
238
tagAlign
12
bed bed3
7
bed bedgraph
4
bed bedMethyl
4
bigBed bedMethyl
4
tar
4
txt
2
bedpe bed3+
2
ibed
1
tagAlign bed3+
Organism
30
Homo sapiens
Biosample type
36
tissue
Organ
13
musculature of body
13
pancreas
9
brain
1
adipose tissue
1
connective tissue
Project
36
AMP
Genome assembly (visualization)
36
hg19
15
GRCh38
Lab
35
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
2
missing controlled_by
Audit category:
1
inconsistent assembly
assay_slims!
3D chromatin structure
files.file_type!
bigBed broadPeak
month_released!
July, 2019
BIOSAMPLE
ASSAY
36 results
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ChIP-seq
ATAC-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
1
pancreas
6
brain
3
cingulate gyrus
2
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