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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
total RNA-seq
4
ATAC-seq
3
ChIP-seq
2
pCHi-C
Assay category
13
Transcription
3D chromatin structure
4
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
211
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
87
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
58
August, 2021
57
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
31
February, 2018
30
December, 2018
26
January, 2019
22
March, 2020
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
2
March, 2019
1
May, 2023
Available data
20
bigWig
16
bam
15
tsv
3
bed narrowPeak
2
bedpe bed3+
2
ibed
Organism
22
Homo sapiens
Biosample type
11
tissue
7
cell line
4
in vitro differentiated cells
Organ
10
pancreas
5
epithelium
2
heart
2
musculature of body
1
blood vessel
1
liver
1
vasculature
Project
17
AMP
5
T1D
Genome assembly (visualization)
22
hg19
16
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
assay_slims!
3D chromatin structure
organ_slims!
large intestine
pituitary gland
BIOSAMPLE
ASSAY
22 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
islet of Langerhans
2
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
cell line
EndoC_BH1
2
2
1
early embryonic cell
2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
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