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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
pCHi-C
Date released
2
March, 2020
Available data
2907
bam
2668
bigWig
1600
tsv
1348
bed narrowPeak
903
fastq
637
bigBed narrowPeak
389
tagAlign
273
bed broadPeak
249
bed bed3+
236
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
3
bedpe bed3+
2
ibed
1
tagAlign bed3+
1
tar
1
vcf
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Project
2
AMP
Genome assembly (visualization)
2
hg19
Lab
2
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
3D chromatin structure
audit.ERROR.category!
inconsistent control
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
2 results
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pCHi-C
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
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