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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
single cell RNA-seq
19
ATAC-seq
19
total RNA-seq
Assay category
68
Transcription
19
DNA accessibility
3D chromatin structure
Date released
587
February, 2021
395
August, 2017
385
November, 2017
333
May, 2020
313
August, 2021
309
May, 2021
288
October, 2019
200
May, 2022
194
February, 2023
192
June, 2019
162
July, 2018
117
May, 2019
98
July, 2019
83
November, 2018
80
April, 2019
80
December, 2017
75
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
March, 2020
38
November, 2019
37
February, 2018
34
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
4
August, 2018
4
March, 2019
4
March, 2023
2
June, 2018
1
August, 2022
1
October, 2022
Available data
87
bam
68
bigWig
68
tsv
44
fastq
19
bed narrowPeak
Organism
87
Homo sapiens
Biosample type
44
tissue
43
primary cell
Organ
77
pancreas
33
epithelium
2
connective tissue
Project
87
AMP
Genome assembly (visualization)
87
GRCh38
87
hg19
Lab
87
AMP-T2D consortium
Audit category:
inconsistent ontology term
assay_slims!
3D chromatin structure
audit.ERROR.category!
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
87 results
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Clear Filters
single cell RNA-seq
ATAC-seq
total RNA-seq
tissue
islet of Langerhans
6
19
19
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
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