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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
20
total RNA-seq
3
ChIP-seq
Assay category
25
DNA accessibility
20
Transcription
3
DNA binding
3D chromatin structure
Target of assay
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
329
February, 2021
314
May, 2020
309
November, 2017
295
August, 2021
259
May, 2021
204
February, 2023
200
May, 2022
198
June, 2019
177
August, 2017
168
July, 2018
112
October, 2019
88
July, 2019
84
November, 2018
63
December, 2017
59
September, 2020
50
March, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
34
December, 2018
28
May, 2019
23
February, 2018
23
February, 2020
23
January, 2019
23
October, 2018
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
14
May, 2023
11
September, 2017
10
December, 2019
10
October, 2017
7
August, 2020
7
January, 2018
5
May, 2024
4
March, 2019
4
March, 2023
3
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
48
bam
26
bed narrowPeak
21
bigWig
20
tsv
Organism
48
Homo sapiens
Biosample type
38
tissue
5
cell line
5
in vitro differentiated cells
Organ
43
pancreas
5
epithelium
adipose tissue
1
connective tissue
Project
48
AMP
Genome assembly (visualization)
46
GRCh38
46
hg19
Lab
48
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
assay_slims!
3D chromatin structure
audit.NOT_COMPLIANT.category!
missing controlled_by
organ_slims!
adipose tissue
target.investigated_as!
histone
BIOSAMPLE
ASSAY
48 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
tissue
islet of Langerhans
19
19
cell line
EndoC_BH1
1
1
3
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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