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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
3
DNase-seq
1
RRBS
Assay category
75
DNA binding
3
DNA accessibility
1
DNA methylation
Target of assay
48
histone
48
histone modification
26
broad histone mark
21
narrow histone mark
18
transcription factor
9
control
6
RNA binding protein
1
chromatin remodeller
Date released
335
May, 2021
303
November, 2017
148
May, 2020
138
February, 2021
87
August, 2021
79
August, 2017
72
February, 2023
57
November, 2018
55
June, 2019
54
May, 2022
54
October, 2019
40
September, 2020
37
February, 2018
35
December, 2017
27
December, 2018
27
July, 2019
23
January, 2019
16
March, 2020
11
July, 2018
10
April, 2018
8
January, 2021
7
December, 2019
6
January, 2018
6
November, 2020
5
May, 2019
5
November, 2019
4
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
64
bam
64
fastq
58
bigWig
52
bed narrowPeak
26
tagAlign
16
bigBed narrowPeak
15
bed broadPeak
15
bigBed broadPeak
3
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
79
Homo sapiens
Biosample type
tissue
62
in vitro differentiated cells
17
primary cell
Organ
62
connective tissue
pancreas
25
epithelium
Project
79
AMP
Genome assembly (visualization)
60
hg19
55
GRCh38
Lab
79
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
assay_slims!
3D chromatin structure
audit.WARNING.category!
inconsistent control read length
biosample_type!
tissue
organ_slims!
pancreas
BIOSAMPLE
ASSAY
79 results
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ChIP-seq
DNase-seq
RRBS
in vitro differentiated cells
adipocyte
61
1
primary cell
skeletal muscle myoblast
14
2
1
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