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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
52
Transcription
41
DNA methylation
Date released
134
May, 2022
19
September, 2020
Available data
2999
bam
2829
bigWig
1599
tsv
1504
bed narrowPeak
1033
fastq
730
bigBed narrowPeak
320
tagAlign
268
bed bed3+
252
bed broadPeak
221
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
3
bedpe bed3+
2
ibed
1
tagAlign bed3+
1
tar
1
vcf
Organism
153
Homo sapiens
Biosample type
153
primary cell
Organ
80
epithelium
80
pancreas
Project
153
HPAP
Lab
153
Klaus Kaestner, Upenn
assay_slims!
3D chromatin structure
award.project!
LungMap
month_released!
November, 2017
organ_slims!
pericardium
BIOSAMPLE
ASSAY
153 results
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single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
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