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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
20
total RNA-seq
13
ChIP-seq
Assay category
26
DNA accessibility
20
Transcription
13
DNA binding
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
646
February, 2021
357
August, 2017
276
August, 2021
256
October, 2019
246
May, 2021
209
June, 2019
168
July, 2018
160
May, 2022
147
February, 2023
102
May, 2020
85
November, 2017
81
July, 2019
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
59
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
43
March, 2020
40
May, 2024
39
February, 2018
35
November, 2018
34
December, 2018
31
December, 2017
25
January, 2019
23
October, 2017
21
February, 2020
19
April, 2020
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
4
August, 2018
4
March, 2019
4
March, 2023
3
June, 2018
1
August, 2022
1
October, 2022
Available data
59
bam
37
bed narrowPeak
31
bigWig
20
tsv
Organism
59
Homo sapiens
Biosample type
39
tissue
15
cell line
5
in vitro differentiated cells
Organ
53
pancreas
15
epithelium
1
adipose tissue
1
connective tissue
Project
59
AMP
Genome assembly (visualization)
57
GRCh38
57
hg19
Lab
59
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
assay_slims!
3D chromatin structure
award.project!
T1D
organ_slims!
liver
vasculature
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
tissue
islet of Langerhans
19
19
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
13
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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