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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
single cell RNA-seq
92
total RNA-seq
58
snATAC-seq
49
ATAC-seq
47
WGBS
Assay category
186
Transcription
107
DNA accessibility
47
DNA methylation
3D chromatin structure
Date released
134
May, 2022
76
February, 2023
59
September, 2020
45
February, 2021
19
April, 2020
7
August, 2020
Available data
169
fastq
153
zippedFastqFolder
10
bigWig
6
tsv
Organism
339
Homo sapiens
Biosample type
321
primary cell
19
tissue
Organ
149
epithelium
149
pancreas
19
lung
Project
3473
AMP
321
HPAP
244
T1D
47
KPMP
19
LungMap
4
community
Genome assembly (visualization)
10
GRCh38
Lab
321
Klaus Kaestner, Upenn
19
Xin Sun, UCSD
Audit category:
27
audit script error
assay_slims!
3D chromatin structure
organ_slims!
liver
pituitary gland
BIOSAMPLE
ASSAY
340 results
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single cell RNA-seq
total RNA-seq
snATAC-seq
ATAC-seq
WGBS
primary cell
Langerhans cell
85
48
pancreatic alpha cell
42
29
31
pancreatic beta cell
11
16
16
exocrine cell
39
pancreatic acinar cell
4
tissue
lung
9
10
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