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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
Assay category
7
DNA accessibility
Date released
4
February, 2021
3
February, 2023
Available data
903
bam
871
bigWig
554
fastq
429
bed narrowPeak
405
tsv
153
zippedFastqFolder
140
tagAlign
126
bigBed narrowPeak
61
bed bed3+
50
bed broadPeak
50
bigBed broadPeak
10
bed bedMethyl
10
bigBed bedMethyl
7
bed bedgraph
6
bed bed3
3
bedpe bed3+
3
txt
2
csv
2
ibed
1
tar
Organism
7
Homo sapiens
Biosample type
7
in vitro differentiated cells
Organ
4
connective tissue
Project
7
AMP
Genome assembly (visualization)
7
hg19
Lab
4
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
assay_slims!
3D chromatin structure
biosample_type!
cell line
tissue
BIOSAMPLE
ASSAY
7 results
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ATAC-seq
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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