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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
5
GRO-seq
1
ATAC-seq
1
DNase-seq
Assay category
67
DNA binding
2
DNA accessibility
Target of assay
37
histone
37
histone modification
22
transcription factor
20
broad histone mark
16
narrow histone mark
8
control
4
RNA binding protein
2
chromatin remodeller
Date released
315
November, 2017
153
May, 2021
122
February, 2021
85
August, 2021
68
August, 2017
61
November, 2018
46
December, 2017
39
February, 2018
35
October, 2019
27
December, 2018
23
January, 2019
22
February, 2023
21
March, 2020
20
November, 2019
6
January, 2018
6
November, 2020
4
March, 2023
2
December, 2019
1
August, 2018
1
May, 2020
1
October, 2022
Available data
59
fastq
54
bam
54
bigWig
43
bed narrowPeak
14
tagAlign
7
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
74
Homo sapiens
Biosample type
tissue
72
in vitro differentiated cells
primary cell
1
cell line
1
stem cell
Organ
68
connective tissue
1
blood
1
bodily fluid
1
embryo
Project
74
AMP
Genome assembly (visualization)
50
hg19
49
GRCh38
5
hg18
Lab
74
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
6
inconsistent control read length
assay_slims!
3D chromatin structure
biosample_type!
primary cell
tissue
BIOSAMPLE
ASSAY
74 results
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Clear Filters
ChIP-seq
GRO-seq
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
67
1
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
cell line
GM12878
1
stem cell
hESC
1
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