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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
1
RRBS
Assay category
68
DNA binding
1
DNA methylation
Target of assay
37
histone
37
histone modification
22
transcription factor
20
broad histone mark
16
narrow histone mark
9
control
4
RNA binding protein
2
chromatin remodeller
Date released
335
May, 2021
148
May, 2020
138
February, 2021
87
August, 2021
72
February, 2023
69
August, 2017
69
November, 2017
54
May, 2022
40
September, 2020
39
February, 2018
38
October, 2019
32
December, 2017
27
July, 2019
16
March, 2020
11
July, 2018
10
April, 2018
8
January, 2019
8
January, 2021
8
June, 2019
7
December, 2019
6
January, 2018
6
November, 2018
5
November, 2019
5
November, 2020
4
March, 2023
2
June, 2018
1
August, 2018
1
May, 2019
1
October, 2022
1
September, 2018
Available data
71
bam
71
fastq
65
bigWig
59
bed narrowPeak
26
tagAlign
bigBed narrowPeak
15
bed broadPeak
15
bigBed broadPeak
7
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
69
Homo sapiens
Biosample type
tissue
67
in vitro differentiated cells
2
primary cell
Organ
67
connective tissue
pancreas
26
epithelium
Project
69
AMP
Genome assembly (visualization)
50
hg19
48
GRCh38
Lab
69
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
6
inconsistent control read length
assay_slims!
3D chromatin structure
biosample_type!
tissue
files.file_type!
bigBed narrowPeak
organ_slims!
pancreas
BIOSAMPLE
ASSAY
69 results
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Clear Filters
ChIP-seq
RRBS
in vitro differentiated cells
adipocyte
67
primary cell
skeletal muscle myoblast
1
1
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