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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
3
single cell RNA-seq
1
RRBS
Assay category
6
DNA binding
3D chromatin structure
3
Transcription
1
DNA methylation
Target of assay
6
control
RNA binding protein
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
6
November, 2017
June, 2019
4
July, 2019
Available data
9
bam
9
bigWig
6
fastq
3
bed broadPeak
3
bed narrowPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
10
Homo sapiens
Biosample type
tissue
10
primary cell
Organ
475
epithelium
435
pancreas
369
liver
115
connective tissue
93
vasculature
90
blood vessel
72
heart
68
artery
59
blood
59
bodily fluid
41
kidney
37
embryo
20
vein
10
brain
3
adipose tissue
3
musculature of body
1
bone element
1
bone marrow
1
eye
1
mammary gland
1
pericardium
Project
10
AMP
Genome assembly (visualization)
10
hg19
6
GRCh38
Lab
10
AMP-T2D consortium
assay_slims!
3D chromatin structure
biosample_type!
tissue
month_released!
June, 2019
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
single cell RNA-seq
RRBS
primary cell
choroid plexus epithelial cell
2
1
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
cerebellar granule cell
2
Purkinje cell
1
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