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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
2
DNase-seq
1
FAIRE-seq
1
pCHi-C
Assay category
17
DNA binding
3
DNA accessibility
3D chromatin structure
Target of assay
15
histone
15
histone modification
9
broad histone mark
6
narrow histone mark
2
control
Date released
20
October, 2019
1
May, 2021
Available data
20
bam
15
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
1
tar
Organism
21
Homo sapiens
Biosample type
21
primary cell
tissue
Organ
501
epithelium
436
pancreas
427
liver
136
connective tissue
99
vasculature
93
blood vessel
80
heart
69
blood
69
bodily fluid
68
artery
55
kidney
37
embryo
20
vein
18
brain
14
musculature of body
5
eye
3
adipose tissue
1
bone element
1
bone marrow
1
mammary gland
1
pericardium
0
lymph node
Project
20
AMP
1
T1D
Genome assembly (visualization)
15
hg19
12
GRCh38
Lab
20
AMP-T2D consortium
1
Kyle Gaulton, UCSD
assay_slims!
3D chromatin structure
biosample_type!
tissue
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
DNase-seq
FAIRE-seq
pCHi-C
primary cell
endothelial cell of umbilical vein
17
2
1
megakaryocyte
1
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