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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
pCHi-C
9
total RNA-seq
2
ATAC-seq
2
ChIP-seq
Assay category
9
Transcription
3D chromatin structure
2
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
593
February, 2021
343
August, 2017
340
May, 2020
274
October, 2019
246
May, 2021
231
August, 2021
218
June, 2019
200
May, 2022
183
February, 2023
168
July, 2018
120
May, 2019
100
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
48
December, 2017
47
September, 2023
40
May, 2024
39
November, 2019
33
March, 2020
27
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
7
August, 2020
7
December, 2018
7
January, 2019
4
March, 2019
3
August, 2018
3
June, 2018
2
January, 2018
1
August, 2022
Available data
28
tsv
11
bigWig
9
bam
2
bed narrowPeak
Organism
33
Homo sapiens
Biosample type
33
tissue
11
cell line
6
in vitro differentiated cells
4
stem cell
0
primary cell
Organ
8
pancreas
5
heart
3
musculature of body
2
blood vessel
2
brain
2
intestine
2
liver
2
vasculature
1
adipose tissue
1
adrenal gland
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
29
AMP
4
T1D
Genome assembly (visualization)
11
hg19
9
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
33 results
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pCHi-C
total RNA-seq
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
2
2
2
psoas muscle
1
2
aorta
1
1
heart left ventricle
1
1
heart right ventricle
1
1
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