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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
total RNA-seq
1
ChIP-seq
Assay category
3D chromatin structure
3
Transcription
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
3
February, 2020
1
October, 2019
Available data
bam
92
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
4
Homo sapiens
Biosample type
4
tissue
Organ
209
kidney
179
heart
168
pancreas
124
epithelium
103
liver
93
bone element
88
connective tissue
54
eye
47
adipose tissue
46
vasculature
45
blood vessel
39
artery
39
brain
31
musculature of body
20
lung
9
blood
9
bodily fluid
8
skeleton
5
gonad
5
ovary
4
limb
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
4
AMP
Lab
4
AMP-T2D consortium
assay_slims!
3D chromatin structure
files.file_type!
bam
fastq
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
BIOSAMPLE
ASSAY
4 results
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Clear Filters
total RNA-seq
ChIP-seq
tissue
gastrocnemius medialis
1
islet of Langerhans
1
tibial artery
1
tibial nerve
1
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