Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
48
single cell RNA-seq
34
ChIP-seq
Assay category
168
Transcription
34
DNA binding
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
715
February, 2021
399
May, 2021
396
August, 2017
342
November, 2017
341
May, 2020
316
August, 2021
300
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
100
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
59
November, 2019
59
September, 2020
54
March, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
34
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
4
August, 2018
4
March, 2019
4
March, 2023
3
June, 2018
1
August, 2022
1
October, 2022
Available data
198
bam
194
bigWig
164
tsv
84
fastq
30
bed narrowPeak
30
bigBed narrowPeak
Organism
202
Homo sapiens
Biosample type
127
tissue
48
primary cell
27
cell line
Organ
157
pancreas
33
epithelium
27
blood
27
bodily fluid
7
spleen
2
connective tissue
Project
202
AMP
Genome assembly (visualization)
194
GRCh38
194
hg19
Lab
202
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
1
inconsistent control
assay_slims!
3D chromatin structure
files.file_type!
bigBed broadPeak
month_released!
September, 2017
BIOSAMPLE
ASSAY
202 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
tissue
islet of Langerhans
120
spleen
7
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 10 more…
cell line
GM12878
27
See all biosamples
Download