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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
Assay category
70
DNA binding
Target of assay
136
histone
136
histone modification
70
broad histone mark
66
narrow histone mark
50
control
18
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
24
August, 2017
19
October, 2018
17
September, 2018
6
November, 2019
4
October, 2019
Available data
73
bigWig
70
bam
68
bed narrowPeak
52
fastq
30
bigBed narrowPeak
8
bed broadPeak
tagAlign
6
bed bed3+
Organism
70
Homo sapiens
Biosample type
33
tissue
27
primary cell
10
cell line
Organ
70
pancreas
57
heart
45
blood vessel
45
vasculature
43
epithelium
34
limb
32
connective tissue
25
brain
24
liver
16
adipose tissue
16
nerve
15
kidney
14
artery
12
musculature of body
9
vein
4
embryo
4
spleen
Project
70
AMP
Genome assembly (visualization)
65
GRCh38
65
hg19
Lab
70
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
3
inconsistent control read length
assay_slims!
3D chromatin structure
files.file_type!
tagAlign
month_released!
November, 2018
BIOSAMPLE
ASSAY
70 results
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Clear Filters
ChIP-seq
tissue
body of pancreas
11
islet of Langerhans
10
endocrine pancreas
8
pancreas
4
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
cell line
EndoC_BH1
6
Panc1
4
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