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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
ChIP-seq
13
total RNA-seq
Assay category
97
DNA binding
13
Transcription
Target of assay
42
transcription factor
34
histone
34
histone modification
21
control
19
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
110
bam
94
fastq
92
bigWig
75
bed narrowPeak
50
bigBed narrowPeak
45
tsv
15
bed bed3+
2
bedpe bed3+
2
ibed
Organism
110
Homo sapiens
Biosample type
57
tissue
45
in vitro differentiated cells
5
cell line
3
stem cell
Organ
64
liver
22
epithelium
13
embryo
6
pancreas
2
heart
2
musculature of body
1
blood vessel
1
vasculature
Project
105
AMP
5
T1D
Genome assembly (visualization)
93
GRCh38
93
hg19
Lab
110
AMP-T2D consortium
Audit category:
27
inconsistent control
9
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
110 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
38
1
right lobe of liver
10
islet of Langerhans
2
psoas muscle
2
aorta
1
+ See 3 more…
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 3 more…
cell line
EndoC_BH1
1
2
early embryonic cell
2
stem cell
hESC
3
See all biosamples
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