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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
DNase-seq
4
ChIP-seq
Assay category
80
DNA accessibility
4
DNA binding
Target of assay
4
transcription factor
Date released
79
June, 2019
4
August, 2017
1
November, 2018
Available data
200
bam
196
bed narrowPeak
170
bigWig
114
bigBed narrowPeak
84
bed bed3+
81
bed broadPeak
80
bigBed broadPeak
64
xls
57
txt
44
fastq
31
tsv
8
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
1
bedpe bed3+
Organism
84
Homo sapiens
Biosample type
74
tissue
10
primary cell
Organ
78
kidney
36
limb
34
musculature of body
32
brain
30
heart
28
pancreas
25
connective tissue
19
epithelium
18
ureter
11
liver
11
vasculature
9
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
84
AMP
Genome assembly (visualization)
84
GRCh38
77
hg19
Lab
84
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
4
missing controlled_by
assay_slims!
3D chromatin structure
month_released!
February, 2021
BIOSAMPLE
ASSAY
84 results
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DNase-seq
ChIP-seq
tissue
kidney
13
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
+ See 6 more…
primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
kidney capillary endothelial cell
1
+ See 3 more…
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